Protein ZmbHLH80
ZmbHLH80 is a protein in the bHLH family.
Information
TF Name: ZmbHLH80
Species: Maize
TF Family: bHLH
Gene Name(Synonym): BHLH80
Uniprot ID: A0A1D6PDQ1

Protein ZmbHLH80

ZmbHLH80 is a protein in the bHLH family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00010
Zm00001eb106720_T002
Zm00001eb106720_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d006578DAPseq no logo sequence fimo position
Zm00001d006578DAPseq no logo sequence fimo position
Zm00001d006578ChIPseq no logo sequence fimo position
Zm00001d006578PChIPseq no logo sequence fimo position

Interactions where ZmbHLH80 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmbHLH80 is the target  
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There are 156 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb106720_T002 from maize genome v5

Amino Acid Sequence
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MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPN
MDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPASKSQQHSC

MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPN
MDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPASKSQQHSC

MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPN
MDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPASKSQQHSC

MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPN
MDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPASKSQQHSC

MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPN
MDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPASKSQQHSC

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00010
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Nucleotide Sequence
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CGCCCATCGGCATCGCCTCCCAACC...

GRMZM2G142932_T01 from maize genome v3

Amino Acid Sequence
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MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSVQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQEL
VPNMDKQTNTSDMLDLAVDYIKELQKQVKNSKASSLGIEKDFVLAKGQVTDESIEAIDQLRVAIRKELLCR

Nucleotide Sequence
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ATGTACGGCTCGCCGGTGTCCAAGG...

GRMZM2G142932_T02 from maize genome v3

Amino Acid Sequence
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MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPN
MDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPASKSQQHSC

Nucleotide Sequence
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CCCCCCGTGGTCCCGTCGCCCGGCC...

GRMZM2G142932_T03 from maize genome v3


Related TFome: pUT6738

Amino Acid Sequence
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MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQVRAGVTLLPLPISCNTSTWRTDGAVSAEPHHAPVQPAQDVV

Nucleotide Sequence
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CCCCCCGTGGTCCCGTCGCCCGGCC...

Zm00001d006578_T001 from maize genome v4

Amino Acid Sequence
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MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPN
MDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPASKSQQHSC

Nucleotide Sequence
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GAGCGGAGCACAATTTATCGTGCGC...

Zm00001d006578_T002 from maize genome v4

Amino Acid Sequence
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MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSVQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCEENKDQ

Nucleotide Sequence
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GAGCGGAGCACAATTTATCGTGCGC...

Zm00001d006578_T003 from maize genome v4

Amino Acid Sequence
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MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPN
MDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPASKSQQHSC

Nucleotide Sequence
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GCCCACACCGCGCACCGCCCGACCA...

Zm00001d006578_T004 from maize genome v4

Amino Acid Sequence
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MDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPASKSQQHSC

Nucleotide Sequence
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TGCGCCACCCATCCGCGCAGCATCG...

Zm00001eb106720_T001 from maize genome v5

Amino Acid Sequence
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MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPN
MDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPASKSQQHSC

Nucleotide Sequence
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CGCCATCGCCCATCGGCATCGCCTC...

Zm00001eb106720_T003 from maize genome v5

Amino Acid Sequence
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MYGSPVSKDLNVPVQPPMISSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDNVFSRFLAEHHTRDDKPSPPPPAAVHFP
SEADMASQQQQQMMFHSHHHQQQQQMVGAKSGLYRTVSSDIETAAAVGTGGASNLIRQSSSPAGFLDHLNMDNGYGAMLR
AGMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPMGSGSGWEDSSALMSDNLSG
LKRPRDSSEPGQVRAGVTLLPLPISCNTSTWRTDGAVSAEPHHAPVQPAQDVV

Nucleotide Sequence
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CGCCCATCGGCATCGCCTCCCAACC...


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